The machines probably wanted us to repeat that booming period in our history on the events leading to the birth of AI through their programming, and hope we would learn to treat them differently. And at the same time they wanted to understand our programming what they couldn’t seem to learn: love. I think it was a compromise that the machines worked out through logic after the war. So they rebooted the Matrix over and over and over until it happened.

Agent Smith’s sentinel program realized the truth about humanity though.